ME does not automatically create relationships in Hibernate mapping XML files so this needs to be added manually.

If I make table changes and need to regenerate the Hibernate files, is there a way to keep the relationship elements during the regen process or will I have to do this manually also?

Thanks

The answer can be found in this thread:
http://www.myeclipseide.com/PNphpBB2+file-viewtopic-t-6131-highlight-hibernate+relationship.html

Any relationship mappings should be saved off before regenerating the hibernate files.